Basic Information
Locus ID:
gene-LOC120110250
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
5-kinase 6
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 14771939 | 14774985 | - | gene-LOC120110250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.50 | 54,083.12 Da | 34.85 | 50.49 | -0.82 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02493 | MORN repeat | 207 | 228 | 1.4E-4 | IPR003409 |
| Pfam | PF02493 | MORN repeat | 161 | 182 | 1.9E-6 | IPR003409 |
| Pfam | PF02493 | MORN repeat | 115 | 133 | 1.7E-4 | IPR003409 |
| Pfam | PF02493 | MORN repeat | 184 | 206 | 4.4E-7 | IPR003409 |
| Pfam | PF02493 | MORN repeat | 69 | 91 | 8.7E-8 | IPR003409 |
| Pfam | PF02493 | MORN repeat | 138 | 159 | 1.4E-5 | IPR003409 |
| Pfam | PF02493 | MORN repeat | 92 | 113 | 7.1E-7 | IPR003409 |
| Pfam | PF13639 | Ring finger domain | 435 | 470 | 2.0E-9 | IPR001841 |
| SUPERFAMILY | SSF82185 | Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain | 64 | 181 | 5.49E-32 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 437 | 476 | 1.11E-12 | - |
| Gene3D | G3DSA:2.20.110.10 | - | 99 | 143 | 5.1E-10 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 433 | 478 | 5.0E-13 | IPR013083 |
| Gene3D | G3DSA:2.20.110.10 | - | 190 | 252 | 7.7E-10 | - |
| Gene3D | G3DSA:2.20.110.10 | - | 59 | 98 | 8.9E-8 | - |
| Gene3D | G3DSA:2.20.110.10 | - | 144 | 189 | 5.2E-12 | - |
| SMART | SM00698 | morn | 90 | 111 | 0.0057 | IPR003409 |
| SMART | SM00698 | morn | 205 | 226 | 0.006 | IPR003409 |
| SMART | SM00698 | morn | 159 | 180 | 3.1E-5 | IPR003409 |
| SMART | SM00698 | morn | 67 | 88 | 6.3E-7 | IPR003409 |
| SMART | SM00698 | morn | 136 | 157 | 1.3E-5 | IPR003409 |
| SMART | SM00698 | morn | 113 | 134 | 0.12 | IPR003409 |
| SMART | SM00698 | morn | 182 | 203 | 1.8E-5 | IPR003409 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 445 | 470 | 9.258371 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 49 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 305 | 338 | - | - |
KEGG Pathway
Pathway:
ko00562 (Inositol phosphate metabolism)
map00562 (Inositol phosphate metabolism)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko04011 (MAPK signaling pathway - yeast)
map04011 (MAPK signaling pathway - yeast)
ko04070 (Phosphatidylinositol signaling system)
map04070 (Phosphatidylinositol signaling system)
ko04072 (Phospholipase D signaling pathway)
map04072 (Phospholipase D signaling pathway)
ko04139 (Mitophagy - yeast)
map04139 (Mitophagy - yeast)
map04666 (Fc gamma R-mediated phagocytosis)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G07960.2 | - | 0 |
| RefSeq | XP_038980627.1 | phosphatidylinositol 4-phosphate 5-kinase 6-like [Phoenix dactylifera] | 0 |
| Q9SFB8 | Phosphatidylinositol 4-phosphate 5-kinase 6 OS=Arabidopsis thaliana OX=3702 GN=PIP5K6 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B9A4N4 | phosphatidylinositol 4-phosphate 5-kinase 6-like OS=Phoenix dactylifera OX=42345 GN=LOC120110250 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Cocos nucifera | 2 | COCNU_02G017950, COCNU_02G017960 |
| Arecaceae | Phoenix dactylifera | 7 | gene-LOC103700215, gene-LOC103700566, gene-LOC120110110 ... |