Basic Information
Locus ID:
gene-LOC120110162
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
PAPA-1-like conserved region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 4044141 | 4049043 | + | gene-LOC120110162 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.29 | 65,304.84 Da | 63.60 | 49.39 | -1.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04795 | PAPA-1-like conserved region | 454 | 533 | 1.3E-18 | IPR006880 |
| Pfam | PF04438 | HIT zinc finger | 550 | 581 | 1.3E-6 | IPR007529 |
| SMART | SM01406 | PAPA_1_2 | 454 | 534 | 2.8E-29 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 314 | 453 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 52 | 100 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 407 | 421 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 470 | 509 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 320 | 376 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 387 | 405 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 121 | 300 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 16 | 108 | - | - |
| Coils | Coil | Coil | 490 | 513 | - | - |
| Coils | Coil | Coil | 443 | 480 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56460.1 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_038980236.1 | eukaryotic translation initiation factor 5B-like [Phoenix dactylifera] | 0 |
| TrEMBL | A0A8B9A0X6 | eukaryotic translation initiation factor 5B-like OS=Phoenix dactylifera OX=42345 GN=LOC120110162 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology