Basic Information
Locus ID:
gene-LOC120108963
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold001681F | 39485 | 43983 | - | gene-LOC120108963 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 122,934.19 Da | 43.68 | 111.37 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 861 | 1129 | 3.85747E-86 | - |
| Pfam | PF00069 | Protein kinase domain | 858 | 1123 | 8.2E-44 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 250 | 309 | 3.0E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 588 | 648 | 3.6E-8 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 682 | 708 | 1.7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 296 | 534 | 7.14E-58 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 470 | 755 | 7.14E-53 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 46 | 324 | 4.76E-52 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 840 | 1126 | 5.53E-71 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 153 | 223 | 1.0E-15 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 152 | 1.0E-23 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 820 | 926 | 2.8E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 542 | 781 | 2.2E-67 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 467 | 541 | 3.4E-14 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 927 | 1131 | 1.8E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 224 | 387 | 1.3E-50 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 388 | 466 | 1.0E-18 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 708 | 732 | 71.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 441 | 465 | 62.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 297 | 321 | 1.2 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 202 | 225 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 106 | 130 | 24.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 855 | 1127 | 1.2E-35 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 659 | 683 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 345 | 369 | 5.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 131 | 154 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 587 | 611 | 7.1 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 273 | 296 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 393 | 417 | 100.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 855 | 1129 | 37.092575 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 517 | 539 | 7.072797 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 972 | 984 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 861 | 884 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 708 | 721 | 6.8E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 614 | 627 | 6.8E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G73080.1 | PEP1 receptor 1. Encodes a leucine-rich repeat receptor kinase. Functions as a receptor for AtPep1 to amplify innate immunity response to pathogen attacks. | 0 |
| RefSeq | XP_038978621.1 | probable leucine-rich repeat receptor-like protein kinase At5g63930 [Phoenix dactylifera] | 0 |
| Q9SSL9 | Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana OX=3702 GN=PEPR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B8ZWF0 | probable leucine-rich repeat receptor-like protein kinase At5g63930 OS=Phoenix dactylifera OX=42345 GN=LOC120108963 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg2137 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30166990 |
| Arecaceae | Cocos nucifera | 1 | COCNU_10G009110 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103711259, gene-LOC120108963 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_04.1110.V1.1 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate08g19500 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG05.1251 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00011074, Pov_00034559 |
| Poaceae | Echinochloa crus-galli | 6 | AH01.2526, AH01.2527, BH01.2855, BH01.2857, CH01.3064 ... |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_2AG0120090, gene-QOZ80_2AG0120110 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0108800.1, HORVU.MOREX.r3.5HG0480440.1 |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_005384, gene-QYE76_045167, gene-QYE76_045217 |
| Poaceae | Oryza coarctata | 2 | Oco20G001010, Oco20G001020 |
| Poaceae | Oryza sativa | 2 | LOC_Os10g06740.1, LOC_Os10g06760.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_01G254700, gene-BS78_01G254800 |
| Poaceae | Puccinellia tenuiflora | 5 | Pt_Chr0301897, Pt_Chr0301916, Pt_Chr0301917, Pt_Chr0701996 ... |
| Poaceae | Sporobolus alterniflorus | 1 | Chr15G016710 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G197400, Tel5E01G350100 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC2AG010300, gene_TRIDC5AG034110 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS2A02G090100.1.cds1, TraesCS2B02G105800.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb026550_P001, Zm00001eb034800_P002 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-42998 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g13073 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc06g08480 |
| Salicaceae | Populus euphratica | 1 | populus_peu29401 |
| Solanaceae | Lycium barbarum | 3 | gene-LOC132631233, gene-LOC132632151, gene-LOC132632152 |
| Solanaceae | Solanum chilense | 2 | SOLCI004878800, SOLCI004878900 |
| Zosteraceae | Zostera marina | 1 | Zosma01g26240.v3.1 |