Basic Information
Locus ID:
gene-LOC120108559
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Short Name:
PUX1
Description:
Tether containing UBX domain for
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold001392F | 814 | 2269 | - | gene-LOC120108559 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.74 | 11,133.58 Da | 49.89 | 96.56 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_038978125.1 | plant UBX domain-containing protein 1-like [Phoenix dactylifera] | 0 |
| TrEMBL | A0A8B8ZV08 | plant UBX domain-containing protein 1-like OS=Phoenix dactylifera OX=42345 GN=LOC120108559 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg17724, jg40435 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_3895 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah000252 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_5g120430 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg31530, Sbi_jg57754 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg25401 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00019500 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl54324, Sgl54335, Sgl59670 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000006983, gene:ENSEOMG00000021084 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.5AG0025800, CQ.Regalona.r1.5BG0027290 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30023860 |
| Apiaceae | Apium graveolens | 4 | Ag3G00891, Ag3G00892, Ag4G00724, Ag9G00429 |
| Arecaceae | Cocos nucifera | 2 | COCNU_11G002090, scaffold000154G000270 |
| Arecaceae | Phoenix dactylifera | 8 | gene-LOC103711082, gene-LOC103723315, gene-LOC113461824 ... |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_02.965.V1.1, AsparagusV1_04.537.V1.1 |
| Asteraceae | Flaveria trinervia | 4 | Ftri13G08631, Ftri15G13879, Ftri18G24174, Ftri1G01325 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT3G27310.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10004822m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp2g16470.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB02g067460.2N, BniB07g035870.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq02G1950 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl02G2023 |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno04g04390, gene.Cymno05g03530 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0229s00004.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate09g09940 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-10851, nbisL1-mrna-4450 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG05.201 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00027805 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb7G35303 |
| Poaceae | Echinochloa crus-galli | 3 | AH09.1361, BH09.1543, CH09.1661 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0313000, gene-QOZ80_4BG0344160 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0176710.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_044768 |
| Poaceae | Oryza coarctata | 2 | Oco07G008960, Oco08G008900 |
| Poaceae | Oryza sativa | 1 | LOC_Os04g40870.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G140000 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0206863, Pt_Chr0307224 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr23G010270, Chr25G009400, Chr26G009470 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G596000 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG049780, gene_TRIDC2BG052790 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G320500.1, TraesCS2B02G362600.2 ... |
| Poaceae | Zea mays | 3 | Zm00001eb055680_P001, Zm00001eb079230_P002 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-36919, nbis-gene-7363 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g19939, Zma_g21491 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG03.163, evm.TU.LG12.1555 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g07510 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_3_RagTag.1986 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-2454, nbisL1-mrna-2523 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-6800 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-3138 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000019l.26 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00001910 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-11995 |
| Salicaceae | Populus euphratica | 2 | populus_peu01880, populus_peu35937 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132622706 |
| Solanaceae | Solanum chilense | 1 | SOLCI000008600 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107008657 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.26152_chr11_+ |
| Tamaricaceae | Tamarix chinensis | 1 | TC03G0529 |
| Zosteraceae | Zostera marina | 1 | Zosma01g34530.v3.1 |