halophFGD

Basic Information

Locus ID: gene-LOC120108369

Species & Taxonomic ID: Phoenix dactylifera & 42345

Genome Assembly: GCF_009389715.1

Description: F-box protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
scaffold001297F	71288	73734	-	gene-LOC120108369

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.02	38,952.11 Da	39.90	91.72	-0.25

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF12937	F-box-like	19	55	2.9E-6	IPR001810
SUPERFAMILY	SSF81383	F-box domain	14	66	5.89E-9	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	3	56	2.6E-7	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description
TAIR	AT4G18380.1	F-box family protein.
RefSeq	XP_008777014.1	F-box protein At4g18380-like [Phoenix dactylifera]
Swiss-Prot	O49508	F-box protein At4g18380 OS=Arabidopsis thaliana OX=3702 GN=At4g18380 PE=2 SV=1
TrEMBL	A0A8B9A3G6	F-box protein At4g18380-like OS=Phoenix dactylifera OX=42345 GN=LOC120108369 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	4	jg20775, jg22282, jg25021, jg38760
Aizoaceae	Mesembryanthemum crystallinum	1	gene_606
Amaranthaceae	Atriplex hortensis	1	Ah016312
Amaranthaceae	Beta vulgaris	1	BVRB_8g188050
Amaranthaceae	Salicornia bigelovii	2	Sbi_jg40583, Sbi_jg50612
Amaranthaceae	Salicornia europaea	1	Seu_jg2169
Amaranthaceae	Suaeda aralocaspica	1	GOSA_00029116
Amaranthaceae	Suaeda glauca	3	Sgl45105, Sgl49877, Sgl49923
Amaranthaceae	Chenopodium album	3	gene:ENSEOMG00000009224, gene:ENSEOMG00000032584 ... gene:ENSEOMG00000044374
Amaranthaceae	Chenopodium quinoa	2	CQ.Regalona.r1.8AG0009740, CQ.Regalona.r1.8BG0010770
Anacardiaceae	Pistacia vera	2	pistato.v30051090, pistato.v30057670
Apiaceae	Apium graveolens	2	Ag11G04926, Ag8G00767
Arecaceae	Cocos nucifera	5	COCNU_01G016070, COCNU_06G020410, COCNU_12G005370 ... COCNU_14G008700, scaffold005887G000020
Arecaceae	Phoenix dactylifera	7	gene-LOC103697030, gene-LOC103703693, gene-LOC103704990 ... gene-LOC103709050, gene-LOC103710526, gene-LOC103718102, gene-LOC120108369
Asparagaceae	Asparagus officinalis	2	AsparagusV1_02.1272.V1.1, AsparagusV1_06.1886.V1.1
Asteraceae	Flaveria trinervia	4	Ftri11G28598, Ftri15G08350, Ftri5G07547, Ftri5G33564
Brassicaceae	Arabidopsis thaliana	3	AT1G30200.2, AT4G18380.1, AT5G46170.1
Brassicaceae	Eutrema salsugineum	3	Thhalv10000919m.g.v1.0, Thhalv10007915m.g.v1.0 ... Thhalv10025383m.g.v1.0
Brassicaceae	Schrenkiella parvula	3	Sp1g26020.v2.2, Sp2g11030.v2.2, Sp7g15660.v2.2
Brassicaceae	Brassica nigra	3	BniB04g011150.2N, BniB04g045540.2N, BniB05g018060.2N
Casuarinaceae	Casuarina equisetifolia	1	Ceq04G0211
Casuarinaceae	Casuarina glauca	1	Cgl04G0299
Cymodoceaceae	Cymodocea nodosa	4	gene.Cymno01g09140, gene.Cymno02g17820, gene.Cymno02g17840 ... gene.Cymno03g02750
Hydrocharitaceae	Thalassia testudinum	3	gene.Thate01g22400, gene.Thate05g03810, gene.Thate07g01890
Malvaceae	Hibiscus hamabo Siebold & Zucc.	3	nbisL1-mrna-3808, nbisL1-mrna-4674, nbisL1-mrna-7531
Nitrariaceae	Nitraria sibirica	1	evm.TU.LG12.69
Plantaginaceae	Plantago ovata	2	Pov_00013120, Pov_00038501
Plumbaginaceae	Limonium bicolor	1	Lb4G25554
Poaceae	Echinochloa crus-galli	13	AH01.3814, AH02.3408, AH05.1792, AH05.1964, BH01.4154 ... BH02.3320, BH05.1958, BH05.2088, CH01.4432, CH02.3087, CH02.3915, CH05.2027, CH05.2161
Poaceae	Eleusine coracana subsp. coracana	10	gene-QOZ80_1AG0034810, gene-QOZ80_1AG0037310 ... gene-QOZ80_1BG0084860, gene-QOZ80_1BG0087430, gene-QOZ80_3AG0246400, gene-QOZ80_3BG0281800, gene-QOZ80_5AG0367460, gene-QOZ80_5AG0368790, gene-QOZ80_5BG0414860, gene-QOZ80_5BG0416340
Poaceae	Hordeum vulgare	5	HORVU.MOREX.r3.1HG0069870.1.CDS1 ... HORVU.MOREX.r3.1HG0078420.1.CDS1, HORVU.MOREX.r3.3HG0292080.1.CDS1, HORVU.MOREX.r3.3HG0296140.1.CDS1, HORVU.MOREX.r3.4HG0380410.1.CDS1
Poaceae	Lolium multiflorum	6	gene-QYE76_013970, gene-QYE76_014834, gene-QYE76_055851 ... gene-QYE76_055852, gene-QYE76_056229, gene-QYE76_068298
Poaceae	Oryza coarctata	10	Oco01G021360, Oco01G022930, Oco02G022190, Oco02G023650 ... Oco05G012160, Oco06G014250, Oco09G012780, Oco09G013850, Oco10G012860, Oco10G013920
Poaceae	Oryza sativa	5	LOC_Os01g56390.1, LOC_Os01g59690.1, LOC_Os03g20500.1 ... LOC_Os05g41130.1, LOC_Os05g43490.2
Poaceae	Paspalum vaginatum	6	gene-BS78_01G301400, gene-BS78_01G370700 ... gene-BS78_03G289800, gene-BS78_03G312700, gene-BS78_09G185500, gene-BS78_09G197800
Poaceae	Puccinellia tenuiflora	3	Pt_Chr0405679, Pt_Chr0605567, Pt_Chr0605580
Poaceae	Sporobolus alterniflorus	20	Chr01G017240, Chr01G018090, Chr01G033440, Chr02G006690 ... Chr02G008450, Chr02G012760, Chr03G017150, Chr03G018460, Chr04G010050, Chr05G025030, Chr05G026690, Chr07G001750, Chr08G017130, Chr08G023420, Chr12G006160, Chr12G019480, Chr18G012620, Chr18G013540, Chr22G004100, Chr22G005130
Poaceae	Thinopyrum elongatum	5	Tel1E01G496600, Tel1E01G536300, Tel3E01G498200 ... Tel3E01G538800, Tel4E01G319600
Poaceae	Triticum dicoccoides	10	gene_TRIDC1AG045730, gene_TRIDC1AG048900 ... gene_TRIDC1BG051770, gene_TRIDC1BG055580, gene_TRIDC3AG045130, gene_TRIDC3AG048530, gene_TRIDC3BG051110, gene_TRIDC3BG054540, gene_TRIDC4AG017680, gene_TRIDC4BG034680
Poaceae	Triticum aestivum	16	TraesCS1A02G307800.1.cds1, TraesCS1A02G329300.1.cds1 ... TraesCS1B02G318500.1.cds1, TraesCS1B02G342700.1, TraesCS1D02G307200.1.cds1, TraesCS1D02G331400.1.cds1, TraesCS3A02G296700.1.cds1, TraesCS3A02G336900.1.cds1, TraesCS3B02G340400.1.cds1, TraesCS3B02G368000.1.cds1, TraesCS3D02G306000.1.cds1, TraesCS3D02G329900.1.cds1, TraesCS3D02G518800.1, TraesCS4A02G127600.1.cds1, TraesCS4B02G177100.1.cds1, TraesCS4D02G178800.1.cds1
Poaceae	Zea mays	9	Zm00001eb106070_P001, Zm00001eb139210_P001 ... Zm00001eb149190_P001, Zm00001eb150090_P001, Zm00001eb152000_P001, Zm00001eb291260_P001, Zm00001eb292460_P001, Zm00001eb352260_P001, Zm00001eb352820_P001
Poaceae	Zoysia japonica	8	nbis-gene-11796, nbis-gene-14295, nbis-gene-14388 ... nbis-gene-1771, nbis-gene-25326, nbis-gene-31191, nbis-gene-31394, nbis-gene-3457
Poaceae	Zoysia macrostachya	9	Zma_g11235, Zma_g11383, Zma_g1320, Zma_g26895, Zma_g26965 ... Zma_g28478, Zma_g28561, Zma_g3734, Zma_g8749
Portulacaceae	Portulaca oleracea	6	evm.TU.LG10.181, evm.TU.LG17.177, evm.TU.LG18.1079 ... evm.TU.LG18.1082, evm.TU.LG20.791, evm.TU.LG20.793
Posidoniaceae	Posidonia oceanica	3	gene.Posoc01g28800, gene.Posoc02g06490, gene.Posoc03g16700
Rhizophoraceae	Bruguiera sexangula	2	evm.TU.Scaffold_14_RagTag.913, evm.TU.Scaffold_16_RagTag.829
Rhizophoraceae	Carallia pectinifolia	2	nbisL1-mrna-24992, nbisL1-mrna-840
Rhizophoraceae	Ceriops tagal	2	nbisL1-mrna-12979, nbisL1-mrna-3884
Rhizophoraceae	Ceriops zippeliana	2	nbisL1-mrna-17228, nbisL1-mrna-19201
Rhizophoraceae	Kandelia candel	2	add.evm.TU.utg000025l.42, evm.TU.utg000022l.78
Rhizophoraceae	Kandelia obovata	3	Maker00012271, Maker00016107, Maker00016159
Rhizophoraceae	Rhizophora apiculata	2	nbisL1-mrna-16812, nbisL1-mrna-20194
Rhizophoraceae	Rhizophora mangle	2	nbisL1-mrna-10313, nbisL1-mrna-9130
Salicaceae	Populus euphratica	2	populus_peu09857, populus_peu22152
Solanaceae	Lycium barbarum	2	gene-LOC132609180, gene-LOC132621858
Solanaceae	Solanum chilense	2	SOLCI006023400, SOLCI007434200
Solanaceae	Solanum pennellii	2	gene-LOC107011125, gene-LOC107028832
Tamaricaceae	Reaumuria soongarica	2	STRG.10823_chr07_-, STRG.18321_chr09_-
Tamaricaceae	Tamarix chinensis	2	TC06G1052, TC07G1906
Zosteraceae	Zostera marina	4	Zosma01g32910.v3.1, Zosma01g42750.v3.1, Zosma01g42760.v3.1 ... Zosma05g29710.v3.1