Basic Information
Locus ID:
gene-LOC120108162
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold001202F | 69696 | 73551 | + | gene-LOC120108162 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.69 | 138,250.22 Da | 29.11 | 108.13 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 746 | 805 | 2.4E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 870 | 926 | 1.9E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 65 | 2.0E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 386 | 445 | 1.0E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 1040 | 1210 | 4.0E-36 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 122 | 181 | 6.8E-8 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1022 | 1212 | 9.58E-54 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 608 | 931 | 1.18E-66 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 294 | 642 | 2.75E-68 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 47 | 325 | 8.16E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1000 | 1113 | 2.6E-28 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 186 | 374 | 6.9E-54 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 672 | 962 | 7.5E-88 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 185 | 1.2E-42 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 570 | 671 | 7.7E-30 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1114 | 1218 | 9.3E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 472 | 569 | 4.1E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 375 | 471 | 5.8E-34 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 913 | 937 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 144 | 167 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 816 | 840 | 7.9 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 168 | 192 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 576 | 600 | 84.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 96 | 120 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 648 | 672 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 768 | 792 | 8.1 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 432 | 456 | 44.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 624 | 647 | 94.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 216 | 240 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 528 | 552 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 889 | 911 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 480 | 504 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 384 | 408 | 63.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 336 | 360 | 110.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 336 | 362 | 380.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 480 | 506 | 260.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 384 | 410 | 120.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 768 | 797 | 110.0 | - |
| SMART | SM00220 | serkin_6 | 1035 | 1250 | 5.5E-13 | IPR000719 |
| SMART | SM00365 | LRR_sd22_2 | 96 | 122 | 620.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 528 | 554 | 19.0 | - |
| SMART | SM00369 | LRR_typ_2 | 864 | 888 | 360.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 816 | 848 | 160.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 432 | 458 | 160.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 288 | 314 | 170.0 | - |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 770 | 793 | 7.280716 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1035 | 1250 | 30.718142 | IPR000719 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 1158 | 1170 | - | IPR008266 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1041 | 1064 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 387 | 400 | 3.7E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 816 | 829 | 3.7E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G08850.2 | Leucine-rich repeat receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_038977672.1 | probable leucine-rich repeat receptor-like protein kinase At1g35710 [Phoenix dactylifera] | 0 |
| Q8VZG8 | MDIS1-interacting receptor like kinase 2 OS=Arabidopsis thaliana OX=3702 GN=MIK2 PE=1 SV=3 | 0 | |
| TrEMBL | A0A8B8ZWD0 | probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Phoenix dactylifera OX=42345 GN=LOC120108162 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for gene-LOC120108162.