Basic Information
Locus ID:
gene-LOC120108161
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold001202F | 49903 | 50856 | + | gene-LOC120108161 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.30 | 26,790.11 Da | 34.96 | 108.13 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 86 | 107 | 0.47 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 132 | 192 | 6.0E-7 | IPR001611 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 12 | 48 | 2.8E-6 | IPR025875 |
| SUPERFAMILY | SSF52058 | L domain-like | 6 | 246 | 1.12E-53 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 84 | 246 | 3.7E-50 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2 | 83 | 9.2E-25 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 11 | 34 | 40.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 59 | 83 | 50.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 179 | 203 | 16.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 35 | 58 | 20.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 181 | 204 | 7.057395 | IPR001611 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 227 | 240 | 1.8E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 182 | 195 | 1.8E-6 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_038977671.1 | MDIS1-interacting receptor like kinase 2-like [Phoenix dactylifera] | 0 |
| TrEMBL | A0A8B8ZTR2 | MDIS1-interacting receptor like kinase 2-like OS=Phoenix dactylifera OX=42345 GN=LOC120108161 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Phoenix dactylifera | 4 | gene-LOC103717954, gene-LOC113461818, gene-LOC120106016 ... |