Basic Information
Locus ID:
gene-LOC120107853
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Glyco_18
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold001044F | 19644 | 21051 | + | gene-LOC120107853 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.53 | 38,797.83 Da | 26.66 | 75.21 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02879 | GH18_plant_chitinase_class_V | 8 | 348 | 2.01151E-131 | - |
| Pfam | PF00704 | Glycosyl hydrolases family 18 | 13 | 342 | 1.5E-70 | IPR001223 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 11 | 346 | 7.21E-68 | IPR017853 |
| SUPERFAMILY | SSF54556 | Chitinase insertion domain | 248 | 313 | 4.71E-12 | IPR029070 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 29 | 342 | 6.7E-99 | - |
| Gene3D | G3DSA:3.10.50.10 | - | 247 | 313 | 6.7E-99 | IPR029070 |
| SMART | SM00636 | 2g34 | 10 | 342 | 4.2E-82 | IPR011583 |
| ProSiteProfiles | PS51910 | Glycosyl hydrolases family 18 (GH18) domain profile. | 10 | 357 | 63.661827 | IPR001223 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19810.1 | Glycosyl hydrolase family protein with chitinase insertion domain. | 0 |
| RefSeq | XP_038977279.1 | class V chitinase CHIT5-like [Phoenix dactylifera] | 0 |
| A0A1B1J8Z2 | Class V chitinase CHIT5 OS=Lotus japonicus OX=34305 GN=CHIT5 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8B9A1H3 | class V chitinase CHIT5-like OS=Phoenix dactylifera OX=42345 GN=LOC120107853 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology