Basic Information
Locus ID:
gene-LOC120107561
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Ubiquitin carboxyl-terminal hydrolase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold000901F | 181872 | 189083 | - | gene-LOC120107561 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.75 | 67,485.05 Da | 58.81 | 73.60 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02661 | Peptidase_C19E | 50 | 361 | 2.38111E-136 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 51 | 360 | 1.1E-38 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 47 | 366 | 3.73E-78 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 43 | 375 | 8.5E-87 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 51 | 363 | 47.184441 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 52 | 67 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 437 | 468 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 488 | 515 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 438 | 467 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65450.1 | ubiquitin-specific protease 17. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_038976817.1 | LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 16-like [Phoenix dactylifera] | 0 |
| Q9FKP5 | Ubiquitin carboxyl-terminal hydrolase 17 OS=Arabidopsis thaliana OX=3702 GN=UBP17 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B8ZTY2 | LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 16-like OS=Phoenix dactylifera OX=42345 GN=LOC120107561 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology