Basic Information
Locus ID:
gene-LOC120107389
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Fasciclin-like arabinogalactan protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold000848F | 4554 | 6171 | + | gene-LOC120107389 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.28 | 43,041.83 Da | 30.64 | 92.40 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02469 | Fasciclin domain | 196 | 327 | 2.0E-14 | IPR000782 |
| Pfam | PF02469 | Fasciclin domain | 34 | 109 | 4.5E-5 | IPR000782 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 29 | 173 | 6.67E-17 | IPR036378 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 191 | 327 | 9.81E-19 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 163 | 328 | 2.9E-11 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 21 | 162 | 5.8E-9 | IPR036378 |
| SMART | SM00554 | fasc_3 | 59 | 174 | 1.8 | IPR000782 |
| SMART | SM00554 | fasc_3 | 223 | 328 | 7.5E-16 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 23 | 162 | 9.395277 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 184 | 325 | 12.080835 | IPR000782 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 330 | 389 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G12730.1 | FASCICLIN-like arabinogalactan 2. AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cds | 0 |
| RefSeq | XP_038976581.1 | fasciclin-like arabinogalactan protein 2 [Phoenix dactylifera] | 0 |
| Q9SU13 | Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLA2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B8ZQR6 | fasciclin-like arabinogalactan protein 2 OS=Phoenix dactylifera OX=42345 GN=LOC120107389 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology