HalophFGD

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Basic Information
Locus ID: gene-LOC120106406
Species & Taxonomic ID: Phoenix dactylifera & 42345
Genome Assembly: GCF_009389715.1
Description: zinc finger
Maps and Mapping Data
Chromosome Start End Strand ID
scaffold000545F 220844 223520 + gene-LOC120106406
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.01 47,516.86 Da 52.55 77.48 -0.93
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF57756 Retrovirus zinc finger-like domains 120 153 5.23E-6 IPR036875
ProSiteProfiles PS50158 Zinc finger CCHC-type profile. 132 145 9.026372 IPR001878
Coils Coil Coil 221 283 - -
Gene Ontology
Molecular Function:
GO:0003676 (nucleic acid binding) GO:0008270 (zinc ion binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_038975341.1 uncharacterized protein LOC120106406 [Phoenix dactylifera] 0
TrEMBL A0A8B8ZMB1 uncharacterized protein LOC120106406 OS=Phoenix dactylifera OX=42345 GN=LOC120106406 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Suaeda glauca 28 Sgl00169, Sgl03111, Sgl03123, Sgl05219, Sgl08211, Sgl10299 ...
Sgl10826, Sgl15481, Sgl16180, Sgl22549, Sgl27731, Sgl32714, Sgl35809, Sgl38004, Sgl39835, Sgl40305, Sgl41124, Sgl45593, Sgl50374, Sgl52388, Sgl54686, Sgl59427, Sgl62087, Sgl66696, Sgl79751, Sgl80303, Sgl82205, Sgl82751
Arecaceae Phoenix dactylifera 1 gene-LOC120106406
Solanaceae Lycium barbarum 1 gene-LOC132613087
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.