halophFGD

Basic Information

Locus ID: gene-LOC120106338

Species & Taxonomic ID: Phoenix dactylifera & 42345

Genome Assembly: GCF_009389715.1

Description: F-box protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
scaffold000529F	98187	99098	+	gene-LOC120106338

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.01	34,664.59 Da	44.10	86.24	-0.29

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF81383	F-box domain	29	78	1.7E-9	IPR036047
TIGRFAM	TIGR01640	F_box_assoc_1: F-box protein interaction domain	145	297	4.2E-14	IPR017451
MobiDBLite	mobidb-lite	consensus disorder prediction	1	25	-	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G10430.1	F-box and associated interaction domains-containing protein.
RefSeq	XP_038975264.1	putative F-box/kelch-repeat protein At3g17570 [Phoenix dactylifera]
TrEMBL	A0A8B8ZV52	putative F-box/kelch-repeat protein At3g17570 OS=Phoenix dactylifera OX=42345 GN=LOC120106338 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Arecaceae	Phoenix dactylifera	2	gene-LOC120105565, gene-LOC120106338
Poaceae	Echinochloa crus-galli	1	BH07.864
Poaceae	Eleusine coracana subsp. coracana	2	gene-QOZ80_2AG0105240, gene-QOZ80_2BG0158700
Poaceae	Hordeum vulgare	1	HORVU.MOREX.r3.6HG0572400.1.CDS1
Poaceae	Lolium multiflorum	1	gene-QYE76_021370
Poaceae	Oryza coarctata	2	Oco03G004720, Oco04G005180
Poaceae	Oryza sativa	1	LOC_Os02g10600.1
Poaceae	Paspalum vaginatum	1	gene-BS78_04G076200
Poaceae	Thinopyrum elongatum	1	Tel6E01G327400
Poaceae	Triticum dicoccoides	2	gene_TRIDC6AG022960, gene_TRIDC6BG028380
Poaceae	Triticum aestivum	3	TraesCS6A02G162200.1.cds1, TraesCS6B02G189200.1 ... TraesCS6D02G150100.1.cds1
Poaceae	Zea mays	1	Zm00001eb205830_P002
Poaceae	Zoysia macrostachya	1	Zma_g12395