Basic Information
Locus ID:
gene-LOC120106016
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold000432F | 8033 | 15627 | - | gene-LOC120106016 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.48 | 107,361.77 Da | 28.74 | 112.08 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 68 | 6.7E-13 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 604 | 664 | 1.7E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 125 | 184 | 1.4E-7 | IPR001611 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 220 | 259 | 2.6E-6 | IPR025875 |
| Pfam | PF13855 | Leucine rich repeat | 676 | 736 | 1.0E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 754 | 809 | 1.5E-8 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 907 | 971 | 1.46E-8 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 491 | 812 | 2.75E-66 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 211 | 521 | 5.57E-64 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 50 | 283 | 3.74E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 893 | 972 | 1.6E-12 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 619 | 714 | 6.2E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 219 | 368 | 8.6E-51 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 216 | 1.5E-48 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 369 | 526 | 2.1E-51 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 715 | 841 | 2.9E-37 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 527 | 618 | 2.9E-24 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 507 | 530 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 483 | 506 | 270.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 291 | 314 | 310.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 315 | 341 | 86.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 699 | 725 | 120.0 | - |
| SMART | SM00369 | LRR_typ_2 | 147 | 170 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 699 | 723 | 5.6 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 747 | 771 | 310.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 171 | 195 | 62.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 387 | 410 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 435 | 459 | 69.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 772 | 796 | 9.8 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 99 | 123 | 17.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 651 | 674 | 170.0 | - |
| SMART | SM00369 | LRR_typ_2 | 651 | 675 | 23.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 291 | 315 | 46.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 219 | 243 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 339 | 363 | 45.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 411 | 437 | 89.0 | - |
| SMART | SM00369 | LRR_typ_2 | 411 | 434 | 88.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 243 | 264 | 16.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 387 | 410 | 38.0 | - |
| SMART | SM00369 | LRR_typ_2 | 531 | 555 | 23.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 917 | 976 | 8.6267 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 923 | 946 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 699 | 712 | 1.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 606 | 619 | 1.9E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G17230.3 | - | 0 |
| RefSeq | XP_038974781.1 | probable leucine-rich repeat receptor-like protein kinase At1g35710 [Phoenix dactylifera] | 0 |
| Q9SHI2 | Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 OS=Arabidopsis thaliana OX=3702 GN=At1g17230 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8B8ZKR5 | probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Phoenix dactylifera OX=42345 GN=LOC120106016 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Phoenix dactylifera | 4 | gene-LOC103717954, gene-LOC113461818, gene-LOC120106016 ... |