Basic Information
Locus ID:
gene-LOC120105940
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Short Name:
IAA15
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold000402F | 406242 | 410061 | + | gene-LOC120105940 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.42 | 23,031.72 Da | 51.37 | 68.81 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 99 | 202 | 8.2E-50 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 91 | 192 | 3.63E-22 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 95 | 204 | 2.5E-41 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 101 | 193 | 23.172785 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 78 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04730.1 | indoleacetic acid-induced protein 16. early auxin-induced (IAA16) | 0 |
| RefSeq | XP_038974668.1 | auxin-responsive protein IAA1-like [Phoenix dactylifera] | 0 |
| Q5VRD1 | Auxin-responsive protein IAA1 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B7D2B9 | Auxin-responsive protein OS=Phoenix dactylifera OX=42345 GN=LOC103722711 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology