Basic Information
Locus ID:
gene-LOC120105815
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Protein of unknown function (DUF295)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold000373F | 72240 | 73484 | - | gene-LOC120105815 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.64 | 46,933.04 Da | 45.68 | 93.21 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03478 | Protein of unknown function (DUF295) | 302 | 346 | 2.7E-8 | IPR005174 |
| Pfam | PF00646 | F-box domain | 33 | 66 | 8.5E-8 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 30 | 134 | 2.88E-9 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 34 | 71 | 1.1E-6 | - |
| SMART | SM00256 | fbox_2 | 37 | 77 | 0.0048 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22660.1 | F-box family protein with a domain of unknown function (DUF295). | 0 |
| RefSeq | XP_038974498.1 | putative F-box protein At2g33200 [Phoenix dactylifera] | 0 |
| O49647 | Putative F-box protein At4g22660 OS=Arabidopsis thaliana OX=3702 GN=At4g22660 PE=4 SV=1 | 0 | |
| TrEMBL | A0A8B8ZSK4 | putative F-box protein At2g33200 OS=Phoenix dactylifera OX=42345 GN=LOC120105815 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Phoenix dactylifera | 3 | gene-LOC103700067, gene-LOC120105814, gene-LOC120105815 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_02.351.V1.1 |