Basic Information
Locus ID:
gene-LOC120105565
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
F-box Kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 12367642 | 12368982 | - | gene-LOC120105565 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.64 | 51,210.30 Da | 49.94 | 90.05 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08268 | F-box associated domain | 263 | 347 | 8.6E-8 | IPR013187 |
| SUPERFAMILY | SSF81383 | F-box domain | 29 | 75 | 2.88E-11 | IPR036047 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 145 | 375 | 1.3E-24 | IPR017451 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10430.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_038974239.1 | F-box/kelch-repeat protein At3g06240-like [Phoenix dactylifera] | 0 |
| Q9CAE7 | Putative F-box protein At3g10430 OS=Arabidopsis thaliana OX=3702 GN=At3g10430 PE=4 SV=1 | 0 | |
| TrEMBL | A0A8B8ZS16 | F-box/kelch-repeat protein At3g06240-like OS=Phoenix dactylifera OX=42345 GN=LOC120105565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC120105565, gene-LOC120106338 |
| Poaceae | Echinochloa crus-galli | 1 | BH07.864 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0105240, gene-QOZ80_2BG0158700 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0572400.1.CDS1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_021370 |
| Poaceae | Oryza coarctata | 2 | Oco03G004720, Oco04G005180 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g10600.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_04G076200 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G327400 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC6AG022960, gene_TRIDC6BG028380 |
| Poaceae | Triticum aestivum | 3 | TraesCS6A02G162200.1.cds1, TraesCS6B02G189200.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb205830_P002 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g12395 |