Basic Information
Locus ID:
gene-LOC120105007
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Ubiquitin fusion degradation protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold000165F | 87354 | 94485 | - | gene-LOC120105007 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.15 | 31,459.19 Da | 59.97 | 71.83 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 1 | 147 | 2.2E-69 | IPR004854 |
| Gene3D | G3DSA:2.40.40.50 | - | 1 | 70 | 2.9E-31 | IPR042299 |
| Gene3D | G3DSA:3.10.330.10 | - | 72 | 145 | 2.8E-34 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 214 | 238 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 273 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 152 | 184 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 214 | 284 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G21270.1 | ubiquitin fusion degradation 1. | 0 |
| RefSeq | XP_038972973.1 | ubiquitin fusion degradation protein 1 homolog [Phoenix dactylifera] | 0 |
| Q55BK0 | Ubiquitin fusion degradation protein 1 homolog OS=Dictyostelium discoideum OX=44689 GN=ufd1 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8B8ZNB4 | ubiquitin fusion degradation protein 1 homolog OS=Phoenix dactylifera OX=42345 GN=LOC120105007 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology