Basic Information
Locus ID:
gene-LOC120104403
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 4577112 | 4579958 | + | gene-LOC120104403 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 71,882.67 Da | 62.42 | 67.88 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd11449 | bHLH_AtAIB_like | 477 | 553 | 2.07884E-46 | - |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 65 | 247 | 5.6E-52 | IPR025610 |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 484 | 529 | 5.5E-11 | IPR011598 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 483 | 550 | 1.01E-18 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 472 | 559 | 4.5E-17 | IPR036638 |
| SMART | SM00353 | finulus | 486 | 535 | 2.0E-16 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 480 | 529 | 17.129572 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 316 | 336 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 317 | 331 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 61 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 61 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 447 | 490 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 446 | 490 | - | - |
| Coils | Coil | Coil | 526 | 560 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G32640.1 | Basic helix-loop-helix (bHLH) DNA-binding family protein. Encodes a MYC-related transcriptional activator with a typical DNA binding domain of a basic helix-loop-helix leucine zipper motif. Binds to an extended G-Box promoter motif. Its transcription is induced by dehydration stress and ABA treatment. Negative regulator of blue lightmediated photomorphogenic growth and blue and far-red-lightregulated gene expression. Positive regulator of lateral root formation. Regulates diverse JA-dependent functions. Negatively regulates Trp metabolism and biosynthesis of Trp-derived secondary metabolites. Positively regulates flavonoid biosynthesis, resistance to insects, and response to oxidative stress. Regulates other transcription factors, and negatively regulates its own expression. | 0 |
| RefSeq | XP_038971395.1 | transcription factor MYC2-like [Phoenix dactylifera] | 0 |
| Q336P5 | Transcription factor MYC2 OS=Oryza sativa subsp. japonica OX=39947 GN=MYC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B8ZBD6 | transcription factor MYC2-like OS=Phoenix dactylifera OX=42345 GN=LOC120104403 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology