Basic Information
Locus ID:
gene-LOC120104203
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Short Name:
PPCK4
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 1811535 | 1811930 | - | gene-LOC120104203 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.96 | 14,479.22 Da | 69.39 | 85.65 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 6 | 128 | 2.6E-13 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 59 | 130 | 1.1E-9 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 131 | 11.693778 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 46 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04012 (ErbB signaling pathway)
map04012 (ErbB signaling pathway)
ko04020 (Calcium signaling pathway)
map04020 (Calcium signaling pathway)
ko04024 (cAMP signaling pathway)
map04024 (cAMP signaling pathway)
ko04066 (HIF-1 signaling pathway)
map04066 (HIF-1 signaling pathway)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
map04217 (Necroptosis)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04745 (Phototransduction - fly)
map04745 (Phototransduction - fly)
ko04750 (Inflammatory mediator regulation of TRP channels)
map04750 (Inflammatory mediator regulation of TRP channels)
ko04916 (Melanogenesis)
map04916 (Melanogenesis)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_038970804.1 | calcium-dependent protein kinase 8-like [Phoenix dactylifera] | 0 |
| P32298 | G protein-coupled receptor kinase 4 OS=Homo sapiens OX=9606 GN=GRK4 PE=1 SV=3 | 0 | |
| TrEMBL | A0A8B8ZG61 | calcium-dependent protein kinase 8-like OS=Phoenix dactylifera OX=42345 GN=LOC120104203 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC120104203 |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G857400 |
| Poaceae | Triticum aestivum | 2 | TraesCS1B02G164400.1.cds1, TraesCS3B02G363600.1.cds1 |