HalophFGD

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Basic Information
Locus ID: gene-LOC120104201
Species & Taxonomic ID: Phoenix dactylifera & 42345
Genome Assembly: GCF_009389715.1
Description: AAA domain
Maps and Mapping Data
Chromosome Start End Strand ID
chr1 1749102 1750542 - gene-LOC120104201
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.58 29,987.79 Da 59.46 75.49 -0.63
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 11 35 - -
MobiDBLite mobidb-lite consensus disorder prediction 201 275 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 35 - -
Coils Coil Coil 81 101 - -
Coils Coil Coil 25 52 - -
Coils Coil Coil 109 129 - -
KEGG Pathway
KO Term:
K10706 (ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3])
Best hit
Source Best Hit ID Description E-value
RefSeq XP_038970801.1 uncharacterized protein LOC120104201 [Phoenix dactylifera] 0
TrEMBL A0A8B8Z9R1 uncharacterized protein LOC120104201 OS=Phoenix dactylifera OX=42345 GN=LOC120104201 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Arecaceae Phoenix dactylifera 21 gene-LOC103697747, gene-LOC103699045, gene-LOC103707104 ...
gene-LOC113461124, gene-LOC113463184, gene-LOC120104201, gene-LOC120104350, gene-LOC120105316, gene-LOC120105365, gene-LOC120105629, gene-LOC120105733, gene-LOC120106200, gene-LOC120106848, gene-LOC120107472, gene-LOC120109806, gene-LOC120110663, gene-LOC120111196, gene-LOC120112210, gene-LOC120112246, gene-LOC120112558, gene-LOC120113344
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.