Basic Information
Locus ID:
gene-LOC120103911
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr18 | 2346869 | 2355084 | - | gene-LOC120103911 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 99,809.20 Da | 48.28 | 81.34 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 825 | 866 | 1.3313E-23 | - |
| CDD | cd01989 | STK_N | 40 | 194 | 3.45855E-47 | - |
| Pfam | PF04564 | U-box domain | 821 | 890 | 2.8E-18 | IPR003613 |
| Pfam | PF00069 | Protein kinase domain | 535 | 785 | 1.9E-41 | IPR000719 |
| SUPERFAMILY | SSF57850 | RING/U-box | 820 | 890 | 1.94E-22 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 510 | 786 | 5.13E-66 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 66 | 158 | 1.0E-5 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 508 | 604 | 2.4E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 605 | 804 | 5.0E-47 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 819 | 890 | 4.4E-27 | IPR013083 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 32 | 159 | 1.1E-5 | IPR014729 |
| SMART | SM00504 | Ubox_2 | 824 | 887 | 8.7E-26 | IPR003613 |
| SMART | SM00220 | serkin_6 | 532 | 798 | 3.5E-31 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 820 | 890 | 35.172268 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 532 | 798 | 33.573212 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 538 | 559 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 650 | 662 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 490 | 512 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 207 | 232 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 205 | 232 | - | - |
| Coils | Coil | Coil | 462 | 496 | - | - |
| Coils | Coil | Coil | 357 | 377 | - | - |
| Coils | Coil | Coil | 385 | 447 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_038971298.1 | U-box domain-containing protein 33-like isoform X2 [Phoenix dactylifera] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8B8ZIL5 | U-box domain-containing protein 33-like isoform X2 OS=Phoenix dactylifera OX=42345 GN=LOC120103911 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology