Basic Information
Locus ID:
gene-LOC114078458
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 69635687 | 69637243 | - | gene-LOC114078458 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.10 | 33,982.50 Da | 24.82 | 95.17 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 81 | 285 | 1.1E-14 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 32 | 287 | 2.7E-31 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 11 | 295 | 2.0E-31 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 23 | 287 | 17.827934 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G26730.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_027775146.1 | probable inactive receptor kinase At5g58300 [Solanum pennellii] | 0 |
| O48788 | Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana OX=3702 GN=At2g26730 PE=1 SV=1 | 0 | |
| TrEMBL | M1AW20 | Serine-threonine protein kinase, plant-type OS=Solanum tuberosum OX=4113 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 1 | pistato.v30134570 |
| Apiaceae | Apium graveolens | 1 | Ag8G00589 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_06.774.V1.1, AsparagusV1_06.877.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri13G14097, Ftri7G01338 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00028446 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_16_RagTag.89 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-22335 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-4375 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-20395 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000022l.444 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-3582 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-6756 |
| Salicaceae | Populus euphratica | 1 | populus_peu34525 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132637065 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC114078458 |