Basic Information
Locus ID:
gene-LOC114078022
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
lectin protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 62720955 | 62754883 | - | gene-LOC114078022 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.48 | 18,128.98 Da | 22.90 | 86.63 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00139 | Legume lectin domain | 24 | 153 | 1.5E-33 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 35 | 153 | 1.64E-30 | IPR013320 |
| Gene3D | G3DSA:2.60.120.200 | - | 16 | 161 | 2.7E-29 | - |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 46 | 52 | - | IPR019825 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G29050.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_027774319.1 | L-type lectin-domain containing receptor kinase V.9-like [Solanum pennellii] | 0 |
| Q7XUN6 | L-type lectin-domain containing receptor kinase SIT2 OS=Oryza sativa subsp. japonica OX=39947 GN=SIT2 PE=2 SV=2 | 0 | |
| TrEMBL | K4C0H9 | Lectin_legB domain-containing protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_9BG0698140 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC114078022 |