HalophFGD

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Basic Information
Locus ID: gene-LOC114076117
Species & Taxonomic ID: Solanum pennellii & 28526
Genome Assembly: GCF_001406875.1
Description: Zinc finger, GRF-type
Maps and Mapping Data
Chromosome Start End Strand ID
chr2 28087018 28087530 + gene-LOC114076117
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.10 20,218.08 Da 48.29 65.29 -0.96
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF06839 GRF zinc finger 23 64 1.5E-9 IPR010666
Coils Coil Coil 75 102 - -
Gene Ontology
Molecular Function:
GO:0008270 (zinc ion binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_027770488.1 uncharacterized protein LOC114076117 [Solanum pennellii] 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Solanaceae Lycium barbarum 6 gene-LOC132602543, gene-LOC132613424, gene-LOC132619278 ...
gene-LOC132629411, gene-LOC132634081, gene-LOC132638386
Solanaceae Solanum chilense 2 SOLCI000728800, SOLCI005741500
Solanaceae Solanum pennellii 10 gene-LOC107028148, gene-LOC114075058, gene-LOC114076072 ...
gene-LOC114076117, gene-LOC114076837, gene-LOC114076875, gene-LOC114077166, gene-LOC114077323, gene-LOC114078021, gene-LOC114078671
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.