Basic Information
Locus ID:
gene-LOC114074350
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 76223132 | 76224415 | - | gene-LOC114074350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 49,085.08 Da | 44.77 | 76.23 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 20 | 61 | 1.4E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 15 | 70 | 1.31E-9 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 18 | 74 | 5.2E-7 | - |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 141 | 353 | 4.1E-16 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 16 | 64 | 10.451268 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_027768031.1 | putative F-box protein At3g52320 [Solanum pennellii] | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Solanaceae | Lycium barbarum | 1 | gene-LOC132599762 |
| Solanaceae | Solanum chilense | 3 | SOLCI000907300, SOLCI001142300, SOLCI001142400 |
| Solanaceae | Solanum pennellii | 4 | gene-LOC107022514, gene-LOC107022919, gene-LOC114074350 ... |