Basic Information
Locus ID:
gene-LOC114073832
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 71674810 | 71679802 | + | gene-LOC114073832 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.82 | 111,666.19 Da | 30.49 | 100.54 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 713 | 985 | 4.0E-48 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 80 | 137 | 2.8E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 75 | 1.2E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 535 | 594 | 6.2E-9 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 280 | 596 | 1.65E-66 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 64 | 356 | 3.06E-54 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 709 | 989 | 3.91E-72 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 387 | 627 | 4.1E-64 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 796 | 1010 | 1.3E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 284 | 386 | 2.4E-32 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 711 | 795 | 6.4E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 190 | 1.6E-41 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 191 | 283 | 7.6E-29 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 341 | 365 | 57.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 101 | 124 | 75.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 197 | 221 | 39.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 557 | 580 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 293 | 317 | 33.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 437 | 461 | 38.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 711 | 988 | 9.4E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 711 | 995 | 39.156139 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 717 | 741 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 839 | 851 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 997 | 1025 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 989 | 1025 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_027767531.1 | MDIS1-interacting receptor like kinase 1 [Solanum pennellii] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology