Basic Information
Locus ID:
gene-LOC113461818
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold000616F | 7719 | 12737 | - | gene-LOC113461818 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 99,748.84 Da | 29.25 | 110.55 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 257 | 316 | 9.9E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 670 | 725 | 5.9E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 41 | 100 | 4.4E-9 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 839 | 901 | 2.8E-9 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 545 | 604 | 2.5E-6 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 439 | 763 | 4.59E-56 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 10 | 250 | 4.25E-51 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 213 | 534 | 1.22E-65 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 824 | 902 | 1.97E-16 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 804 | 903 | 7.1E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2 | 136 | 2.5E-35 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 137 | 301 | 1.4E-52 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 473 | 767 | 1.7E-84 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 302 | 472 | 3.4E-53 | IPR032675 |
| SMART | SM00365 | LRR_sd22_2 | 423 | 449 | 620.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 615 | 638 | 570.0 | - |
| SMART | SM00369 | LRR_typ_2 | 63 | 86 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 15 | 39 | 12.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 327 | 350 | 200.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 279 | 305 | 34.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 207 | 233 | 62.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 15 | 41 | 620.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 135 | 161 | 230.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 567 | 593 | 79.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 327 | 353 | 210.0 | - |
| SMART | SM00369 | LRR_typ_2 | 303 | 326 | 340.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 375 | 401 | 420.0 | - |
| SMART | SM00369 | LRR_typ_2 | 87 | 111 | 22.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 423 | 446 | 33.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 688 | 712 | 32.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 447 | 471 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 615 | 639 | 7.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 183 | 207 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 135 | 159 | 54.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 351 | 375 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 567 | 591 | 17.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 279 | 302 | 97.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 399 | 422 | 50.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 834 | 903 | 11.891654 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 840 | 863 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 688 | 701 | 4.9E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 162 | 175 | 4.9E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G08850.2 | Leucine-rich repeat receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_026657661.2 | probable leucine-rich repeat receptor-like protein kinase At1g35710 [Phoenix dactylifera] | 0 |
| Q8VZG8 | MDIS1-interacting receptor like kinase 2 OS=Arabidopsis thaliana OX=3702 GN=MIK2 PE=1 SV=3 | 0 | |
| TrEMBL | A0A8B8J0J9 | probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Phoenix dactylifera OX=42345 GN=LOC113461818 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Phoenix dactylifera | 4 | gene-LOC103717954, gene-LOC113461818, gene-LOC120106016 ... |