Basic Information
Locus ID:
gene-LOC108511633
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Serine threonine-protein kinase-like protein CCR4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 38255563 | 38258310 | - | gene-LOC108511633 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.47 | 80,820.32 Da | 43.66 | 83.98 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 455 | 730 | 3.72857E-97 | - |
| Pfam | PF00069 | Protein kinase domain | 450 | 670 | 1.2E-43 | IPR000719 |
| Pfam | PF13540 | Regulator of chromosome condensation (RCC1) repeat | 198 | 219 | 6.4E-7 | - |
| Pfam | PF13540 | Regulator of chromosome condensation (RCC1) repeat | 232 | 257 | 3.4E-8 | - |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 76 | 264 | 7.59E-22 | IPR009091 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 429 | 728 | 2.56E-72 | IPR011009 |
| Gene3D | G3DSA:2.130.10.30 | - | 223 | 308 | 5.1E-9 | IPR009091 |
| Gene3D | G3DSA:2.130.10.30 | - | 59 | 222 | 1.2E-14 | IPR009091 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 534 | 737 | 2.8E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 430 | 533 | 3.4E-29 | - |
| SMART | SM00220 | serkin_6 | 449 | 703 | 7.7E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 449 | 732 | 38.138493 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 455 | 477 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 579 | 591 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | XP_017700565.3 | serine/threonine-protein kinase-like protein CCR4 [Phoenix dactylifera] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7MVY1 | serine/threonine-protein kinase-like protein CCR4 OS=Phoenix dactylifera OX=42345 GN=LOC108511633 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology