Basic Information
Locus ID:
gene-LOC108510999
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 10192567 | 10214486 | + | gene-LOC108510999 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.42 | 129,534.34 Da | 36.85 | 94.43 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 839 | 1101 | 7.81966E-94 | - |
| Pfam | PF13855 | Leucine rich repeat | 239 | 299 | 5.6E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 430 | 489 | 2.7E-7 | IPR001611 |
| Pfam | PF11721 | Malectin domain | 565 | 751 | 1.7E-42 | IPR021720 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 836 | 1099 | 1.5E-43 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 98 | 235 | 7.37E-28 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 209 | 533 | 1.96E-58 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 818 | 1129 | 6.61E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 805 | 908 | 6.1E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 909 | 1111 | 5.4E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 65 | 236 | 2.1E-42 | IPR032675 |
| Gene3D | G3DSA:2.60.120.430 | - | 564 | 755 | 7.8E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 380 | 560 | 1.0E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 237 | 379 | 4.8E-47 | IPR032675 |
| SMART | SM00220 | serkin_6 | 833 | 1090 | 6.6E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 833 | 1107 | 35.877052 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 953 | 965 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1155 | 1179 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1155 | 1171 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56140.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_038970401.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56130 isoform X1 [Phoenix dactylifera] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8B8Z8M2 | probable LRR receptor-like serine/threonine-protein kinase At1g56130 isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC108510999 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology