Basic Information
Locus ID:
gene-LOC107032486
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
bHLH-MYC and R2R3-MYB transcription factors N-terminal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 3464698 | 3466345 | - | gene-LOC107032486 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 50,734.46 Da | 42.88 | 85.85 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04873 | ACT_UUR-ACR-like | 401 | 454 | 0.00575789 | - |
| CDD | cd11449 | bHLH_AtAIB_like | 265 | 344 | 1.57069E-39 | - |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 28 | 203 | 8.0E-56 | IPR025610 |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 270 | 315 | 1.8E-11 | IPR011598 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 267 | 330 | 6.02E-18 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 261 | 332 | 3.4E-17 | IPR036638 |
| SMART | SM00353 | finulus | 272 | 321 | 2.0E-16 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 266 | 315 | 17.231188 | IPR011598 |
| Coils | Coil | Coil | 312 | 332 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00870.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein. | 0 |
| RefSeq | XP_015089574.1 | transcription factor MYC2-like [Solanum pennellii] | 0 |
| O23090 | Transcription factor bHLH14 OS=Arabidopsis thaliana OX=3702 GN=BHLH14 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology