Basic Information
Locus ID:
gene-LOC107031961
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
L-type lectin-domain containing receptor kinase VIII.1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 80805447 | 80808731 | + | gene-LOC107031961 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.90 | 78,741.99 Da | 36.44 | 89.07 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 391 | 660 | 5.12134E-95 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 32 | 260 | 5.0199E-81 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 388 | 656 | 3.0E-52 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 32 | 263 | 3.3E-55 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 32 | 269 | 3.08E-60 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 367 | 692 | 1.03E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 461 | 679 | 1.5E-63 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 30 | 268 | 9.1E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 348 | 460 | 1.5E-30 | - |
| SMART | SM00220 | serkin_6 | 385 | 658 | 7.9E-41 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 385 | 667 | 39.240944 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 504 | 516 | - | IPR008271 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 143 | 149 | - | IPR019825 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 391 | 414 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53380.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_015088970.1 | L-type lectin-domain containing receptor kinase VIII.1-like [Solanum pennellii] | 0 |
| Q9LFH9 | L-type lectin-domain containing receptor kinase VIII.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK81 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology