Basic Information
Locus ID:
gene-LOC107031853
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Short Name:
CTR1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 81652830 | 81667740 | + | gene-LOC107031853 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 88,280.49 Da | 45.93 | 85.44 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 541 | 789 | 1.37614E-128 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 536 | 789 | 7.3E-69 | IPR001245 |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 141 | 346 | 2.5E-79 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 521 | 789 | 2.29E-82 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 528 | 613 | 2.7E-38 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 614 | 793 | 4.3E-61 | - |
| SMART | SM00220 | serkin_6 | 535 | 793 | 2.2E-63 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 535 | 793 | 45.148956 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 541 | 562 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 656 | 668 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 650 | 668 | 2.1E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 697 | 707 | 2.1E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 716 | 738 | 2.1E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 609 | 622 | 2.1E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 760 | 782 | 2.1E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 407 | 433 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03730.1 | Protein kinase superfamily protein. Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed. | 0 |
| RefSeq | XP_015088826.1 | serine/threonine-protein kinase CTR1-like isoform X1 [Solanum pennellii] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology