Basic Information
Locus ID:
gene-LOC107031677
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Short Name:
CTR1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 2488345 | 2504494 | + | gene-LOC107031677 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.84 | 92,036.12 Da | 45.38 | 80.87 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 567 | 815 | 9.25223E-133 | - |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 200 | 406 | 9.2E-82 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 562 | 815 | 1.5E-71 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 549 | 815 | 3.37E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 640 | 824 | 3.8E-64 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 554 | 639 | 6.3E-38 | - |
| SMART | SM00220 | serkin_6 | 561 | 819 | 1.7E-68 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 561 | 819 | 46.449284 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 567 | 588 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 682 | 694 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 786 | 808 | 1.9E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 635 | 648 | 1.9E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 723 | 733 | 1.9E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 742 | 764 | 1.9E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 676 | 694 | 1.9E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 464 | 491 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 474 | 488 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03730.1 | Protein kinase superfamily protein. Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed. | 0 |
| RefSeq | XP_015088607.1 | serine/threonine-protein kinase CTR1-like isoform X1 [Solanum pennellii] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology