Basic Information
Locus ID:
gene-LOC107031437
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 39519033 | 39533939 | + | gene-LOC107031437 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.05 | 105,607.44 Da | 36.24 | 93.70 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 627 | 891 | 1.07327E-90 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 624 | 890 | 5.6E-49 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 68 | 1.6E-7 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 42 | 383 | 4.65E-51 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 606 | 919 | 2.19E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 697 | 912 | 9.6E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 181 | 8.1E-38 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 290 | 386 | 5.7E-7 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 592 | 696 | 2.9E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 182 | 289 | 9.8E-25 | IPR032675 |
| SMART | SM00220 | serkin_6 | 621 | 897 | 6.4E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 621 | 900 | 39.509491 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 627 | 649 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 741 | 753 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01950.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_015088302.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 [Solanum pennellii] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology