Basic Information
Locus ID:
gene-LOC107031371
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 2261352 | 2267448 | - | gene-LOC107031371 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.49 | 62,120.50 Da | 39.34 | 79.21 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14136 | STKc_SRPK | 48 | 493 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 59 | 199 | 2.2E-19 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 330 | 493 | 2.0E-19 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 55 | 501 | 3.95E-81 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 35 | 141 | 2.6E-39 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 142 | 494 | 5.4E-78 | - |
| SMART | SM00220 | serkin_6 | 59 | 493 | 4.9E-54 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 59 | 493 | 29.799431 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 65 | 88 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 186 | 198 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 270 | 319 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 270 | 303 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53030.1 | ser/arg-rich protein kinase 4. Encodes a protein kinase SRPK4 that specifically targets Arabidopsis Ser/Arg-rich (SR) slicing factors involved in RNA metabolism. In vitro kinase assay showed that SRPK4 phosphorylates the SR protein RSp31. | 0 |
| RefSeq | XP_015088196.1 | SRSF protein kinase 2 [Solanum pennellii] | 0 |
| P36616 | Protein kinase dsk1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dsk1 PE=3 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology