Basic Information
Locus ID:
gene-LOC107030442
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Bulb-type mannose-specific lectin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 79094005 | 79105662 | - | gene-LOC107030442 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 158,996.44 Da | 33.46 | 85.45 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00028 | B_lectin | 699 | 802 | 3.26821E-22 | IPR001480 |
| Pfam | PF01179 | Copper amine oxidase, enzyme domain | 237 | 641 | 2.7E-135 | IPR015798 |
| Pfam | PF02728 | Copper amine oxidase, N3 domain | 118 | 214 | 4.5E-21 | IPR015802 |
| Pfam | PF02727 | Copper amine oxidase, N2 domain | 25 | 110 | 1.8E-18 | IPR015800 |
| Pfam | PF00069 | Protein kinase domain | 1166 | 1386 | 4.8E-38 | IPR000719 |
| Pfam | PF00954 | S-locus glycoprotein domain | 901 | 970 | 8.5E-9 | IPR000858 |
| Pfam | PF01453 | D-mannose binding lectin | 732 | 814 | 1.2E-15 | IPR001480 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 732 | 817 | 9.95E-19 | IPR036426 |
| SUPERFAMILY | SSF54416 | Amine oxidase N-terminal region | 24 | 115 | 2.43E-19 | IPR016182 |
| SUPERFAMILY | SSF49998 | Amine oxidase catalytic domain | 237 | 643 | 1.57E-139 | IPR036460 |
| SUPERFAMILY | SSF54416 | Amine oxidase N-terminal region | 116 | 222 | 7.41E-29 | IPR016182 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1126 | 1389 | 6.61E-62 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1128 | 1170 | 7.3E-6 | - |
| Gene3D | G3DSA:2.90.10.30 | - | 803 | 938 | 6.0E-10 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1191 | 1394 | 2.2E-54 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 674 | 801 | 6.6E-12 | IPR036426 |
| Gene3D | G3DSA:3.10.450.40 | - | 120 | 211 | 9.4E-26 | - |
| Gene3D | G3DSA:3.10.450.40 | - | 24 | 118 | 2.1E-24 | - |
| Gene3D | G3DSA:2.70.98.20 | Copper amine oxidase, catalytic domain | 241 | 646 | 6.5E-149 | IPR036460 |
| SMART | SM00220 | serkin_6 | 1147 | 1388 | 2.0E-19 | IPR000719 |
| SMART | SM00108 | blect_4 | 689 | 802 | 3.0E-17 | IPR001480 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1053 | 1392 | 26.57688 | IPR000719 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 680 | 800 | 11.110773 | IPR001480 |
| ProSitePatterns | PS01165 | Copper amine oxidase copper-binding site signature. | 604 | 617 | - | IPR000269 |
| ProSitePatterns | PS01164 | Copper amine oxidase topaquinone signature. | 381 | 394 | - | IPR000269 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1234 | 1246 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
ko00260 (Glycine, serine and threonine metabolism)
map00260 (Glycine, serine and threonine metabolism)
ko00350 (Tyrosine metabolism)
map00350 (Tyrosine metabolism)
ko00360 (Phenylalanine metabolism)
map00360 (Phenylalanine metabolism)
ko00410 (beta-Alanine metabolism)
map00410 (beta-Alanine metabolism)
ko00950 (Isoquinoline alkaloid biosynthesis)
map00950 (Isoquinoline alkaloid biosynthesis)
ko00960 (Tropane, piperidine and pyridine alkaloid biosynthesis)
map00960 (Tropane, piperidine and pyridine alkaloid biosynthesis)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
Reaction:
R02382 (Tyramine + H2O + Oxygen <=> 4-Hydroxyphenylacetaldehyde + Ammonia + Hydrogen peroxide)
R02529 (Aminoacetone + H2O + Oxygen <=> Methylglyoxal + Ammonia + Hydrogen peroxide)
R02613 (Phenethylamine + Oxygen + H2O <=> Phenylacetaldehyde + Ammonia + Hydrogen peroxide)
R03139 (1,3-Diaminopropane + Oxygen + H2O <=> 3-Aminopropanal + Ammonia + Hydrogen peroxide)
R04027 (N-Methylputrescine + Oxygen + H+ <=> 1-Methylpyrrolinium + Hydrogen peroxide + Ammonia)
R04300 (Dopamine + H2O + Oxygen <=> 3,4-Dihydroxyphenylacetaldehyde + Ammonia + Hydrogen peroxide)
R06154 (Methylamine + Oxygen + H2O <=> Formaldehyde + Ammonia + Hydrogen peroxide)
R06740 (Cadaverine + H2O + Oxygen <=> 5-Aminopentanal + Ammonia + Hydrogen peroxide)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G14940.1 | amine oxidase 1. atao1 gene of Arabidopsis thaliana encodes an extracellular copper amine oxidase expressed during early stages of vascular tissue development. | 0 |
| RefSeq | XP_027767802.1 | G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 [Solanum pennellii] | 0 |
| O23349 | Primary amine oxidase 1 OS=Arabidopsis thaliana OX=3702 GN=AO1 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology