Basic Information
Locus ID:
gene-LOC107030419
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
F-box LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 76957508 | 76959160 | - | gene-LOC107030419 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.83 | 63,918.41 Da | 35.54 | 99.18 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF46689 | Homeodomain-like | 6 | 56 | 7.44E-6 | IPR009057 |
| SUPERFAMILY | SSF81383 | F-box domain | 70 | 112 | 1.18E-5 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 191 | 419 | 4.24E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 67 | 395 | 4.5E-7 | IPR032675 |
| Gene3D | G3DSA:1.10.10.60 | - | 8 | 56 | 2.3E-15 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G60480.1 | homeobox protein 26. | 0 |
| RefSeq | XP_015087189.1 | F-box/FBD/LRR-repeat protein At1g13570-like [Solanum pennellii] | 0 |
| Q53N87 | Zinc-finger homeodomain protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=ZHD4 PE=2 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology