Basic Information
Locus ID:
gene-LOC107029450
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
L-type lectin-domain containing receptor kinase VIII.1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 1119378 | 1122022 | - | gene-LOC107029450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.25 | 77,204.68 Da | 31.46 | 88.41 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 37 | 249 | 4.1732E-69 | IPR001220 |
| CDD | cd14066 | STKc_IRAK | 389 | 655 | 1.87086E-94 | - |
| Pfam | PF00069 | Protein kinase domain | 385 | 653 | 5.2E-52 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 31 | 255 | 8.2E-55 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 19 | 251 | 1.68E-58 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 365 | 689 | 7.38E-83 | IPR011009 |
| Gene3D | G3DSA:2.60.120.200 | - | 19 | 259 | 3.2E-63 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 459 | 676 | 7.4E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 345 | 458 | 4.2E-31 | - |
| SMART | SM00220 | serkin_6 | 383 | 655 | 7.7E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 383 | 664 | 38.760387 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 502 | 514 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 389 | 412 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53380.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_015086351.1 | L-type lectin-domain containing receptor kinase VIII.1-like [Solanum pennellii] | 0 |
| Q9LFH9 | L-type lectin-domain containing receptor kinase VIII.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK81 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology