Basic Information
Locus ID:
gene-LOC107029427
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 1530364 | 1536440 | + | gene-LOC107029427 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.54 | 48,615.74 Da | 41.80 | 75.84 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 102 | 378 | 2.14767E-99 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 99 | 374 | 3.3E-48 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 71 | 376 | 2.53E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 77 | 181 | 1.3E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 182 | 386 | 3.0E-61 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 96 | 380 | 40.088982 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 102 | 130 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 76 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 55 | 76 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 385 | 410 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09830.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_015086324.1 | serine/threonine-protein kinase PCRK1-like isoform X1 [Solanum pennellii] | 0 |
| Q9SF86 | Serine/threonine-protein kinase PCRK1 OS=Arabidopsis thaliana OX=3702 GN=PCRK1 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology