Basic Information
Locus ID:
gene-LOC107029045
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 13935 | 17639 | - | gene-LOC107029045 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.41 | 53,933.79 Da | 30.48 | 90.00 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 363 | 434 | 7.5E-18 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 26 | 345 | 1.7E-81 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 26 | 345 | 1.69E-83 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 25 | 353 | 1.7E-113 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 356 | 459 | 3.9E-9 | - |
| SMART | SM00768 | X8_cls | 362 | 447 | 1.6E-47 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 260 | 273 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66250.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_010324460.1 | glucan endo-1,3-beta-glucosidase 2-like isoform X1 [Solanum lycopersicum] | 0 |
| Q9C7U5 | Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g66250 PE=2 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology