Basic Information
Locus ID:
gene-LOC107028855
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Leucine-rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 67503998 | 67509186 | + | gene-LOC107028855 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 74,539.78 Da | 37.24 | 98.01 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 120 | 179 | 3.9E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 68 | 1.0E-9 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 416 | 676 | 2.5E-40 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 30 | 238 | 7.23E-43 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 379 | 673 | 4.91E-59 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 492 | 681 | 2.4E-43 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 188 | 3.0E-47 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 378 | 490 | 4.1E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 189 | 257 | 1.3E-9 | IPR032675 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 144 | 166 | 7.165205 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 412 | 677 | 30.576801 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22730.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_015085562.1 | LRR receptor-like serine/threonine-protein kinase GSO1 [Solanum pennellii] | 0 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology