Basic Information
Locus ID:
gene-LOC107028410
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Short Name:
EBF1
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 48204898 | 48208443 | - | gene-LOC107028410 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.97 | 71,182.06 Da | 43.10 | 106.69 | 0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 288 | 310 | 1.2 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 500 | 522 | 0.18 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 583 | 602 | 0.0021 | IPR001611 |
| Pfam | PF00646 | F-box domain | 59 | 103 | 1.8E-4 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 57 | 97 | 1.83E-7 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 193 | 661 | 1.06E-40 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 468 | 665 | 3.9E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 260 | 467 | 7.6E-40 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 156 | 259 | 2.0E-16 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 61 | 95 | 1.4E-5 | - |
| SMART | SM00367 | LRR_CC_2 | 368 | 393 | 0.081 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 210 | 235 | 5.3E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 420 | 445 | 77.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 394 | 419 | 6.9E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 554 | 579 | 7.8 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 262 | 287 | 0.0012 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 580 | 604 | 0.0063 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 606 | 631 | 21.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 527 | 552 | 3.9 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 500 | 525 | 0.02 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 474 | 499 | 0.062 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 288 | 313 | 6.4E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 236 | 261 | 7.3E-6 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_015084951.1 | EIN3-binding F-box protein 1 [Solanum pennellii] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology