Basic Information
Locus ID:
gene-LOC107028312
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 63275430 | 63276910 | - | gene-LOC107028312 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.82 | 51,568.80 Da | 34.08 | 83.67 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05476 | pepsin_A_like_plant | 98 | 463 | 3.11409E-88 | IPR034161 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 99 | 282 | 2.8E-52 | IPR032861 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 305 | 458 | 3.0E-22 | IPR032799 |
| SUPERFAMILY | SSF50630 | Acid proteases | 95 | 463 | 3.11E-86 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 81 | 267 | 1.4E-53 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 284 | 466 | 3.8E-46 | IPR021109 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 25 | 5.0 | - |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 99 | 459 | 40.6469 | IPR033121 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 343 | 354 | - | IPR001969 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G33340.1 | Eukaryotic aspartyl protease family protein. Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. | 0 |
| RefSeq | XP_015084827.1 | aspartic proteinase CDR1-like [Solanum pennellii] | 0 |
| Q6XBF8 | Aspartic proteinase CDR1 OS=Arabidopsis thaliana OX=3702 GN=CDR1 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology