Basic Information
Locus ID:
gene-LOC107028270
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 714733 | 716115 | - | gene-LOC107028270 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.30 | 28,901.24 Da | 35.00 | 89.44 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05476 | pepsin_A_like_plant | 2 | 265 | 1.40266E-73 | IPR034161 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 1 | 89 | 3.9E-21 | IPR032861 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 111 | 261 | 1.3E-26 | IPR032799 |
| SUPERFAMILY | SSF50630 | Acid proteases | 1 | 265 | 1.04E-56 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 88 | 268 | 9.7E-46 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 1 | 87 | 1.9E-20 | IPR021109 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 1 | 261 | 27.068163 | IPR033121 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 143 | 154 | - | IPR001969 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G33340.1 | Eukaryotic aspartyl protease family protein. Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. | 0 |
| RefSeq | XP_027774609.1 | aspartic proteinase CDR1-like [Solanum pennellii] | 0 |
| Q6XBF8 | Aspartic proteinase CDR1 OS=Arabidopsis thaliana OX=3702 GN=CDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2B533 | Peptidase A1 domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_020454 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology