Basic Information
Locus ID:
gene-LOC107028124
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 58977548 | 58979938 | + | gene-LOC107028124 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.84 | 78,722.44 Da | 46.85 | 93.72 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 413 | 692 | 2.82344E-89 | - |
| Pfam | PF13855 | Leucine rich repeat | 96 | 155 | 3.9E-9 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 263 | 284 | 1.3 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 67 | 3.6E-5 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 409 | 687 | 5.4E-47 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 402 | 689 | 3.91E-71 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 38 | 305 | 1.36E-53 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 238 | 333 | 3.2E-15 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 166 | 237 | 2.3E-17 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 384 | 486 | 1.1E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 487 | 695 | 1.8E-61 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 165 | 5.3E-34 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 118 | 142 | 37.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 260 | 284 | 130.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 407 | 697 | 4.8E-29 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 94 | 117 | 17.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 213 | 235 | 74.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 236 | 259 | 130.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 120 | 142 | 7.226811 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 407 | 697 | 37.884079 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 96 | 117 | 7.33462 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 413 | 436 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 540 | 552 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 97 | 110 | 1.5E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 260 | 273 | 1.5E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_015084660.1 | LRR receptor-like serine/threonine-protein kinase HSL2 [Solanum pennellii] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology