Basic Information
Locus ID:
gene-LOC107028105
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 62306303 | 62312106 | + | gene-LOC107028105 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.25 | 73,005.33 Da | 38.38 | 87.34 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 340 | 606 | 1.2E-29 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 126 | 186 | 8.5E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 51 | 216 | 1.59E-20 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 339 | 614 | 1.22E-48 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 199 | 239 | 8.7E-6 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 300 | 411 | 4.0E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 198 | 5.0E-27 | IPR032675 |
| Gene3D | G3DSA:1.20.5.930 | - | 240 | 285 | 4.0E-6 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 412 | 634 | 3.7E-39 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 336 | 611 | 26.477942 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31250.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_015084642.1 | pollen receptor-like kinase 4 [Solanum pennellii] | 0 |
| C0LGR9 | Probable LRR receptor-like serine/threonine-protein kinase At4g31250 OS=Arabidopsis thaliana OX=3702 GN=At4g31250 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology