Basic Information
Locus ID:
gene-LOC107028043
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Inositol polyphosphate phosphatase, catalytic domain homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 5196321 | 5202793 | - | gene-LOC107028043 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 128,068.20 Da | 42.60 | 78.25 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09074 | INPP5c | 592 | 938 | 1.2489E-110 | - |
| Pfam | PF03372 | Endonuclease/Exonuclease/phosphatase family | 597 | 929 | 2.8E-16 | IPR005135 |
| SUPERFAMILY | SSF56219 | DNase I-like | 569 | 962 | 7.2E-60 | IPR036691 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 233 | 577 | 3.57E-23 | IPR036322 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 573 | 971 | 9.1E-103 | IPR036691 |
| Gene3D | G3DSA:2.130.10.10 | - | 374 | 572 | 1.5E-5 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 139 | 330 | 4.5E-10 | IPR015943 |
| SMART | SM00320 | WD40_4 | 223 | 261 | 2.6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 271 | 309 | 0.27 | IPR001680 |
| SMART | SM00320 | WD40_4 | 527 | 564 | 120.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 488 | 525 | 26.0 | IPR001680 |
| SMART | SM00128 | i5p_5 | 590 | 944 | 4.2E-86 | IPR000300 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 968 | 1127 | 8.70179 | IPR000535 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 32 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1106 | 1155 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43900.1 | Endonuclease/exonuclease/phosphatase family protein. | 0 |
| RefSeq | XP_015084583.1 | type I inositol polyphosphate 5-phosphatase 12-like [Solanum pennellii] | 0 |
| O80560 | Type I inositol polyphosphate 5-phosphatase 12 OS=Arabidopsis thaliana OX=3702 GN=IP5P12 PE=1 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology