Basic Information
Locus ID:
gene-LOC107027900
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
bHLH-MYC and R2R3-MYB transcription factors N-terminal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 70346657 | 70348078 | + | gene-LOC107027900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.19 | 46,016.02 Da | 38.52 | 88.54 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 41 | 185 | 1.2E-35 | IPR025610 |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 239 | 284 | 5.2E-11 | IPR011598 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 226 | 292 | 4.71E-17 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 224 | 286 | 5.1E-17 | IPR036638 |
| SMART | SM00353 | finulus | 241 | 290 | 1.5E-16 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 235 | 284 | 16.932695 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 211 | 246 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 222 | 246 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00870.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein. | 0 |
| RefSeq | XP_015084432.2 | transcription factor bHLH14-like [Solanum pennellii] | 0 |
| O23090 | Transcription factor bHLH14 OS=Arabidopsis thaliana OX=3702 GN=BHLH14 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology