Basic Information
Locus ID:
gene-LOC107027881
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 68277137 | 68282305 | + | gene-LOC107027881 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.83 | 74,576.71 Da | 49.30 | 76.97 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00130 | PAS | 13 | 102 | 3.94535E-10 | IPR000014 |
| CDD | cd13999 | STKc_MAP3K-like | 396 | 642 | 1.98293E-128 | - |
| Pfam | PF13426 | PAS domain | 12 | 102 | 2.0E-11 | IPR000014 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 391 | 641 | 1.3E-67 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 367 | 639 | 7.15E-81 | IPR011009 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 5 | 102 | 1.15E-14 | IPR035965 |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 4 | 105 | 2.4E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 469 | 648 | 5.2E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 383 | 468 | 1.0E-27 | - |
| SMART | SM00220 | serkin_6 | 390 | 646 | 2.1E-57 | IPR000719 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 7 | 102 | 3.6E-11 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 390 | 647 | 42.180817 | IPR000719 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 13 | 36 | 11.455423 | IPR000014 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 396 | 417 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 509 | 521 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 569 | 591 | 3.3E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 464 | 477 | 3.3E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 613 | 635 | 3.3E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 503 | 521 | 3.3E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 550 | 560 | 3.3E-14 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 336 | 373 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23050.1 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_015084413.2 | probable serine/threonine-protein kinase SIS8 [Solanum pennellii] | 0 |
| Q9FPR3 | Serine/threonine-protein kinase EDR1 OS=Arabidopsis thaliana OX=3702 GN=EDR1 PE=1 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology