Basic Information
Locus ID:
gene-LOC107027833
Species & Taxonomic ID:
Solanum pennellii & 28526
Genome Assembly:
GCF_001406875.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 63733562 | 63735211 | - | gene-LOC107027833 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.61 | 40,162.04 Da | 26.98 | 108.13 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 82 | 346 | 4.2E-39 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 64 | 347 | 4.72E-62 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 39 | 152 | 1.1E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 153 | 358 | 2.1E-48 | - |
| SMART | SM00220 | serkin_6 | 77 | 353 | 6.2E-22 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 77 | 362 | 31.721655 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 200 | 212 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19300.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_015084375.1 | probable receptor-like protein kinase At1g49730 [Solanum pennellii] | 0 |
| Q6NKZ9 | Probable receptor-like serine/threonine-protein kinase At4g34500 OS=Arabidopsis thaliana OX=3702 GN=At4g34500 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg23657 |
| Apiaceae | Apium graveolens | 1 | Ag9G01571 |
| Asteraceae | Flaveria trinervia | 1 | Ftri14G24301 |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq01G0049, Ceq01G0050 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl01G0028 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00003742 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_14_RagTag.765 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-17650 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000025l.5 |
| Salicaceae | Populus euphratica | 1 | populus_peu08152 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132638246 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107027833 |